SmallData Symposium 2024

 

Daniel Fässler

Department of Psychiatry and Psychotherapy, Medical Center, University of Greifswald
Ellernholzstraße 1-2, 17489 Greifswald

Projects

Publications

Fässler D, [...], Hertel J. Bilophila wadsworthia is linked to basal ganglia atrophy in the general population, Brain, Behavior, and Immunity. Apr 2026
Klier K, Mehrjerd A, Fässler D, [...], Hertel J. Integrating population-based metabolomics with computational microbiome modelling identifies methanol as a urinary biomarker for protective diet-microbiome-host interactions, Food & Function. Aug 2025
Fässler D, Heinken A, Hertel J. Characterising functional redundancy in microbiome communities via relative entropy, Computational and Structural Biotechnology Journal. Mar 2025
Scherer N, Fässler D, Borisov O, Cheng Y, Schlosser P, [...], Schmidts M, [...], Thiele I, Hertel J, Köttgen A. Coupling metabolomics and exome sequencing reveals graded effects of rare damaging heterozygous variants on gene function and human traits, Nature Genetics. Jan 2025

Related Resources in the Small Data Companion

Bahls M, et al. (2025) Human Microbiome Project microbiome models and statistical analysis
Model, algorithm or code
Bahls M, et al. (2025) Study of Health in Pomerania (SHIP) dataset
Dataset
Bahls M, et al. (2025) Human Microbiome Project data
Dataset
Fässler D, et al. (2025) Scripts for "Characterising functional redundancy in microbiome communities via relative entropy"
Model, algorithm or code
Fässler D, et al. (2025) AGORA (assembly of gut microbes)
Dataset
Fässler D, et al. (2025) IBD microbiome community models creation
Model, algorithm or code
Fässler D, et al. (2025) FunRed R package for computing functional redundancy
Model, algorithm or code
Berger U, et al. (2025) Scripts for creation of in silico models and analysis
Model, algorithm or code
Berger U, et al. (2025) UK Biobank Contact for access
Dataset
Berger U, et al. (2025) German Chronic Kidney Disease cohort Contact for access
Dataset
Berger U, et al. (2025) Coupling of metabolomics and exome sequencing reveals graded effects of rare damaging heterozygous variants on gene function and resulting traits and diseases
Original Preprint

Administrative Manager

Marc Schumacher

Institute of Medical Biometry and Statistics,
Faculty of Medicine and Medical Center –
University of Freiburg